RNA–Protein interactions for RNA: ENST00000501708.1

AP001107.1-201, humanhuman

TSL 2 BASIC

Gene AP001107.1, Length 2,792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001107.1-201ENST00000501708 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
AP001107.1-201ENST00000501708 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
AP001107.1-201ENST00000501708 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
AP001107.1-201ENST00000501708 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
AP001107.1-201ENST00000501708 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
AP001107.1-201ENST00000501708 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
AP001107.1-201ENST00000501708 FOXD1Q16676 465 aa17.71■□□□□ 0.43
AP001107.1-201ENST00000501708 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
AP001107.1-201ENST00000501708 MYT1Q01538 1121 aa17.67■□□□□ 0.42
AP001107.1-201ENST00000501708 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
AP001107.1-201ENST00000501708 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AP001107.1-201ENST00000501708 ADRA2BP18089 450 aa17.12■□□□□ 0.33
AP001107.1-201ENST00000501708 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
AP001107.1-201ENST00000501708 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.29
AP001107.1-201ENST00000501708 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
AP001107.1-201ENST00000501708 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
AP001107.1-201ENST00000501708 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
AP001107.1-201ENST00000501708 ABCC9O60706 1549 aa16.61■□□□□ 0.25
AP001107.1-201ENST00000501708 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
AP001107.1-201ENST00000501708 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
AP001107.1-201ENST00000501708 APLP2Q06481 763 aa16.49■□□□□ 0.23
AP001107.1-201ENST00000501708 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
AP001107.1-201ENST00000501708 KCNA4P22459 653 aa16.35■□□□□ 0.21
AP001107.1-201ENST00000501708 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
AP001107.1-201ENST00000501708 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
AP001107.1-201ENST00000501708 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
AP001107.1-201ENST00000501708 NACADO15069 1562 aa16.11■□□□□ 0.17
AP001107.1-201ENST00000501708 MSH5O43196 834 aa16.1■□□□□ 0.17
AP001107.1-201ENST00000501708 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
AP001107.1-201ENST00000501708 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
AP001107.1-201ENST00000501708 HRCP23327 699 aa15.99■□□□□ 0.15
AP001107.1-201ENST00000501708 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
AP001107.1-201ENST00000501708 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
AP001107.1-201ENST00000501708 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
AP001107.1-201ENST00000501708 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
AP001107.1-201ENST00000501708 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
AP001107.1-201ENST00000501708 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
AP001107.1-201ENST00000501708 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
AP001107.1-201ENST00000501708 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
AP001107.1-201ENST00000501708 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
AP001107.1-201ENST00000501708 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
AP001107.1-201ENST00000501708 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
AP001107.1-201ENST00000501708 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.09
AP001107.1-201ENST00000501708 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
AP001107.1-201ENST00000501708 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
AP001107.1-201ENST00000501708 PPARGC1BQ86YN6 1023 aaKnown RBP15.46■□□□□ 0.06
AP001107.1-201ENST00000501708 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
AP001107.1-201ENST00000501708 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
AP001107.1-201ENST00000501708 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.03
AP001107.1-201ENST00000501708 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
AP001107.1-201ENST00000501708 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
AP001107.1-201ENST00000501708 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
AP001107.1-201ENST00000501708 WIZO95785 1651 aa15.16■□□□□ 0.02
AP001107.1-201ENST00000501708 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
AP001107.1-201ENST00000501708 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
AP001107.1-201ENST00000501708 ZBTB22O15209 634 aa15.13■□□□□ 0.01
AP001107.1-201ENST00000501708 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
AP001107.1-201ENST00000501708 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
AP001107.1-201ENST00000501708 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
AP001107.1-201ENST00000501708 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
AP001107.1-201ENST00000501708 UBE2Q2Q8WVN8 375 aa15.07■□□□□ 0
AP001107.1-201ENST00000501708 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ 0
AP001107.1-201ENST00000501708 ATAD2BQ9ULI0 1458 aa15.02□□□□□ -0.01
AP001107.1-201ENST00000501708 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
AP001107.1-201ENST00000501708 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
AP001107.1-201ENST00000501708 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
AP001107.1-201ENST00000501708 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
AP001107.1-201ENST00000501708 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
AP001107.1-201ENST00000501708 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
AP001107.1-201ENST00000501708 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
AP001107.1-201ENST00000501708 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
AP001107.1-201ENST00000501708 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
AP001107.1-201ENST00000501708 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
AP001107.1-201ENST00000501708 PODXL2Q9NZ53 605 aa14.9□□□□□ -0.02
AP001107.1-201ENST00000501708 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
AP001107.1-201ENST00000501708 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
AP001107.1-201ENST00000501708 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
AP001107.1-201ENST00000501708 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
AP001107.1-201ENST00000501708 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
AP001107.1-201ENST00000501708 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
AP001107.1-201ENST00000501708 PCGF6Q9BYE7 350 aa14.79□□□□□ -0.04
AP001107.1-201ENST00000501708 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
AP001107.1-201ENST00000501708 PKNOX2Q96KN3 472 aa14.73□□□□□ -0.05
AP001107.1-201ENST00000501708 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
AP001107.1-201ENST00000501708 ZEB1P37275 1124 aaPredicted RBP14.65□□□□□ -0.06
AP001107.1-201ENST00000501708 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
AP001107.1-201ENST00000501708 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
AP001107.1-201ENST00000501708 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
AP001107.1-201ENST00000501708 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
AP001107.1-201ENST00000501708 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
AP001107.1-201ENST00000501708 ARXQ96QS3 562 aa14.53□□□□□ -0.08
AP001107.1-201ENST00000501708 NESP48681 1621 aa14.53□□□□□ -0.08
AP001107.1-201ENST00000501708 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
AP001107.1-201ENST00000501708 CFTRP13569 1480 aa14.52□□□□□ -0.08
AP001107.1-201ENST00000501708 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
AP001107.1-201ENST00000501708 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
AP001107.1-201ENST00000501708 CCDC136Q96JN2 1154 aa14.45□□□□□ -0.1
AP001107.1-201ENST00000501708 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
AP001107.1-201ENST00000501708 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
AP001107.1-201ENST00000501708 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms