Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CHATP28329 AC015910.1-201ENST00000579400 975 ntBASIC13.11□□□□□ -0.31
CHATP28329 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.11□□□□□ -0.31
CHATP28329 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.11□□□□□ -0.31
CHATP28329 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.11□□□□□ -0.31
CHATP28329 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHATP28329 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.11□□□□□ -0.31
CHATP28329 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.11□□□□□ -0.31
CHATP28329 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHATP28329 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHATP28329 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.1□□□□□ -0.31
CHATP28329 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 AC140479.7-201ENST00000636301 2332 ntBASIC13.1□□□□□ -0.31
CHATP28329 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 AC004461.1-201ENST00000412461 403 ntBASIC13.1□□□□□ -0.31
CHATP28329 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CHATP28329 RBPMS2P1-201ENST00000437762 623 ntBASIC13.1□□□□□ -0.31
CHATP28329 MTND6P24-201ENST00000440466 518 ntBASIC13.1□□□□□ -0.31
CHATP28329 SPDYE14P-201ENST00000442619 822 ntBASIC13.1□□□□□ -0.31
CHATP28329 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.1□□□□□ -0.31
CHATP28329 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CHATP28329 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.1□□□□□ -0.31
CHATP28329 AC005829.1-201ENST00000570002 483 ntBASIC13.1□□□□□ -0.31
CHATP28329 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.1□□□□□ -0.31
CHATP28329 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHATP28329 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.1□□□□□ -0.31
CHATP28329 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CHATP28329 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHATP28329 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CHATP28329 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHATP28329 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.09□□□□□ -0.31
CHATP28329 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.09□□□□□ -0.31
CHATP28329 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.09□□□□□ -0.31
CHATP28329 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.09□□□□□ -0.31
CHATP28329 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 AC015656.1-201ENST00000624209 3578 ntBASIC13.09□□□□□ -0.31
CHATP28329 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHATP28329 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.09□□□□□ -0.31
CHATP28329 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHATP28329 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms