Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MYH9-211ENST00000495928 329 ntTSL 211.4□□□□□ -0.582e-14■□□□□ 9.3
RPS3P23396 MST1-210ENST00000484673 1307 ntTSL 219.43■□□□□ 0.71e-15■□□□□ 9.3
RPS3P23396 MST1-216ENST00000492370 1374 ntTSL 1 (best)17.06■□□□□ 0.321e-15■□□□□ 9.3
RPS3P23396 MST1-219ENST00000494828 621 ntTSL 413.75□□□□□ -0.211e-15■□□□□ 9.3
RPS3P23396 MST1-206ENST00000481055 597 ntTSL 512.6□□□□□ -0.391e-15■□□□□ 9.3
RPS3P23396 MST1-213ENST00000490966 829 ntTSL 512.44□□□□□ -0.421e-15■□□□□ 9.3
RPS3P23396 GSPT1-204ENST00000562169 466 ntTSL 315.5■□□□□ 0.079e-16■□□□□ 9.3
RPS3P23396 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.351e-6■□□□□ 9.3
RPS3P23396 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.61□□□□□ -0.391e-6■□□□□ 9.3
RPS3P23396 GNAS-231ENST00000475610 493 ntTSL 1 (best)9.74□□□□□ -0.851e-19■□□□□ 9.3
RPS3P23396 RPL27A-205ENST00000529227 607 ntTSL 1 (best)17.4■□□□□ 0.381e-58■□□□□ 9.3
RPS3P23396 SRSF5-208ENST00000554929 947 ntTSL 210.07□□□□□ -0.85e-7■□□□□ 9.3
RPS3P23396 SRSF5-216ENST00000556647 644 ntTSL 28.68□□□□□ -1.025e-7■□□□□ 9.3
RPS3P23396 FKBP10-209ENST00000585922 563 ntTSL 418.08■□□□□ 0.486e-12■□□□□ 9.3
RPS3P23396 FKBP10-202ENST00000429461 398 ntTSL 316.34■□□□□ 0.216e-12■□□□□ 9.3
RPS3P23396 ODC1-204ENST00000446285 665 ntTSL 525.79■■□□□ 1.725e-8■□□□□ 9.2
RPS3P23396 ILF3-215ENST00000589485 620 ntTSL 220.1■□□□□ 0.815e-8■□□□□ 9.2
RPS3P23396 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.485e-8■□□□□ 9.2
RPS3P23396 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.255e-8■□□□□ 9.2
RPS3P23396 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.225e-8■□□□□ 9.2
RPS3P23396 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.095e-8■□□□□ 9.2
RPS3P23396 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.45■□□□□ 0.065e-8■□□□□ 9.2
RPS3P23396 ILF3-214ENST00000589416 773 ntTSL 415.26■□□□□ 0.035e-8■□□□□ 9.2
RPS3P23396 SORD-204ENST00000558789 1553 ntTSL 215.06■□□□□ 05e-8■□□□□ 9.2
RPS3P23396 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-8■□□□□ 9.2
RPS3P23396 ILF3-207ENST00000587840 655 ntTSL 514.58□□□□□ -0.085e-8■□□□□ 9.2
RPS3P23396 ILF3-206ENST00000587505 791 ntTSL 514.51□□□□□ -0.095e-8■□□□□ 9.2
RPS3P23396 QARS-232ENST00000634609 553 ntTSL 1 (best)13.95□□□□□ -0.185e-8■□□□□ 9.2
RPS3P23396 ILF3-218ENST00000590009 953 ntTSL 513.51□□□□□ -0.255e-8■□□□□ 9.2
RPS3P23396 QARS-204ENST00000418549 558 ntTSL 413.29□□□□□ -0.285e-8■□□□□ 9.2
RPS3P23396 ILF3-204ENST00000585835 849 ntTSL 313.17□□□□□ -0.35e-8■□□□□ 9.2
RPS3P23396 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.14□□□□□ -0.315e-8■□□□□ 9.2
RPS3P23396 QARS-239ENST00000635278 597 ntTSL 213.06□□□□□ -0.325e-8■□□□□ 9.2
RPS3P23396 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC12.79□□□□□ -0.365e-8■□□□□ 9.2
RPS3P23396 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.385e-8■□□□□ 9.2
RPS3P23396 QARS-235ENST00000634953 583 ntTSL 412.52□□□□□ -0.415e-8■□□□□ 9.2
RPS3P23396 SORD-205ENST00000559230 1502 ntTSL 1 (best)12.49□□□□□ -0.415e-8■□□□□ 9.2
RPS3P23396 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.55e-8■□□□□ 9.2
RPS3P23396 QARS-237ENST00000635194 582 ntTSL 511.62□□□□□ -0.555e-8■□□□□ 9.2
RPS3P23396 QARS-233ENST00000634724 754 ntTSL 211.52□□□□□ -0.575e-8■□□□□ 9.2
RPS3P23396 QARS-227ENST00000634425 520 ntTSL 511.48□□□□□ -0.575e-8■□□□□ 9.2
RPS3P23396 TOMM5-204ENST00000540941 3071 ntTSL 1 (best)11.34□□□□□ -0.595e-8■□□□□ 9.2
RPS3P23396 QARS-243ENST00000635494 568 ntTSL 411.26□□□□□ -0.615e-8■□□□□ 9.2
RPS3P23396 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.625e-8■□□□□ 9.2
RPS3P23396 COX7A2L-207ENST00000482463 1918 ntTSL 211.05□□□□□ -0.645e-8■□□□□ 9.2
RPS3P23396 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.655e-8■□□□□ 9.2
RPS3P23396 QARS-203ENST00000417025 572 ntTSL 510.82□□□□□ -0.685e-8■□□□□ 9.2
RPS3P23396 ILF3-208ENST00000587928 4230 ntTSL 210.68□□□□□ -0.75e-8■□□□□ 9.2
RPS3P23396 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.725e-8■□□□□ 9.2
RPS3P23396 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.865e-8■□□□□ 9.2
RPS3P23396 SORD-203ENST00000558580 1395 ntTSL 5 BASIC9.67□□□□□ -0.865e-8■□□□□ 9.2
RPS3P23396 RTN4-211ENST00000438462 656 ntTSL 59.62□□□□□ -0.873e-15■□□□□ 9.2
RPS3P23396 QARS-226ENST00000634359 437 ntTSL 59.09□□□□□ -0.955e-8■□□□□ 9.2
RPS3P23396 ILF3-211ENST00000589052 637 ntTSL 59.02□□□□□ -0.975e-8■□□□□ 9.2
RPS3P23396 MTHFD2-207ENST00000488086 483 ntTSL 28.58□□□□□ -1.045e-8■□□□□ 9.2
RPS3P23396 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.045e-8■□□□□ 9.2
RPS3P23396 QARS-215ENST00000479495 577 ntTSL 48.48□□□□□ -1.055e-8■□□□□ 9.2
RPS3P23396 HGD-204ENST00000475447 565 ntTSL 37.43□□□□□ -1.225e-8■□□□□ 9.2
RPS3P23396 HGD-209ENST00000492108 631 ntTSL 27.07□□□□□ -1.285e-8■□□□□ 9.2
RPS3P23396 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.323e-15■□□□□ 9.2
RPS3P23396 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.58□□□□□ -1.363e-15■□□□□ 9.2
RPS3P23396 RTN4-214ENST00000486085 955 ntTSL 34.51□□□□□ -1.693e-15■□□□□ 9.2
RPS3P23396 HGD-210ENST00000494453 683 ntTSL 34.15□□□□□ -1.755e-8■□□□□ 9.2
RPS3P23396 NONO-213ENST00000486613 555 ntTSL 24.06□□□□□ -1.765e-8■□□□□ 9.2
RPS3P23396 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.83e-15■□□□□ 9.2
RPS3P23396 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.583e-12■□□□□ 9.2
RPS3P23396 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.033e-12■□□□□ 9.2
RPS3P23396 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.033e-12■□□□□ 9.2
RPS3P23396 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.233e-12■□□□□ 9.2
RPS3P23396 EIF4G1-235ENST00000482303 493 ntTSL 213.32□□□□□ -0.283e-10■□□□□ 9.2
RPS3P23396 SLC5A6-218ENST00000492069 705 ntTSL 313.07□□□□□ -0.329e-7■□□□□ 9.2
RPS3P23396 SRSF7-212ENST00000487773 637 ntTSL 54.15□□□□□ -1.753e-12■□□□□ 9.2
RPS3P23396 SRSF7-207ENST00000432873 603 ntTSL 33.35□□□□□ -1.873e-12■□□□□ 9.2
RPS3P23396 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.62□□□□□ -0.551e-323■□□□□ 9.2
RPS3P23396 AKAP1-212ENST00000573326 1580 ntTSL 511.57□□□□□ -0.561e-6■□□□□ 9.2
RPS3P23396 CSDE1-206ENST00000483030 873 ntTSL 26.97□□□□□ -1.293e-17■□□□□ 9.2
RPS3P23396 CSDE1-213ENST00000530784 545 ntTSL 26□□□□□ -1.453e-17■□□□□ 9.2
RPS3P23396 POLR2E-203ENST00000586215 756 ntTSL 214.35□□□□□ -0.112e-6■□□□□ 9.2
RPS3P23396 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.885e-8■□□□□ 9.1
RPS3P23396 TJP1-210ENST00000558447 720 ntTSL 325.45■■□□□ 1.665e-6■□□□□ 9.1
RPS3P23396 GUCD1-205ENST00000407973 773 ntTSL 322.86■■□□□ 1.255e-6■□□□□ 9.1
RPS3P23396 NDUFV1-222ENST00000532260 574 ntTSL 422.58■■□□□ 1.218e-13■□□□□ 9.1
RPS3P23396 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.25e-6■□□□□ 9.1
RPS3P23396 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.875e-9■□□□□ 9.1
RPS3P23396 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.725e-6■□□□□ 9.1
RPS3P23396 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.92■□□□□ 0.625e-6■□□□□ 9.1
RPS3P23396 GUCD1-208ENST00000468170 619 ntTSL 218.67■□□□□ 0.585e-6■□□□□ 9.1
RPS3P23396 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.555e-6■□□□□ 9.1
RPS3P23396 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.55e-6■□□□□ 9.1
RPS3P23396 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.475e-6■□□□□ 9.1
RPS3P23396 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.475e-6■□□□□ 9.1
RPS3P23396 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.385e-6■□□□□ 9.1
RPS3P23396 SLC38A3-201ENST00000417121 491 ntTSL 517.04■□□□□ 0.325e-6■□□□□ 9.1
RPS3P23396 PKMYT1-214ENST00000574415 1006 ntTSL 516.67■□□□□ 0.265e-6■□□□□ 9.1
RPS3P23396 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.235e-6■□□□□ 9.1
RPS3P23396 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.235e-9■□□□□ 9.1
RPS3P23396 PKMYT1-218ENST00000575632 979 ntTSL 216.43■□□□□ 0.225e-6■□□□□ 9.1
RPS3P23396 NSUN2-203ENST00000504374 3217 ntTSL 216.22■□□□□ 0.195e-6■□□□□ 9.1
RPS3P23396 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.175e-6■□□□□ 9.1
RPS3P23396 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.165e-6■□□□□ 9.1
Retrieved 100 of 24,271 protein–RNA pairs in 375.9 ms