Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AP006288.1-201ENST00000446065 395 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AP000344.2-201ENST00000512987 629 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 KRT8P23-201ENST00000560090 1207 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AC084121.4-201ENST00000641598 221 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AC134684.3-201ENST00000641758 218 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 AF228730.8-201ENST00000642140 221 ntBASIC14.88□□□□□ -0.03
LINGO3P0C6S8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINGO3P0C6S8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 FOXO1B-201ENST00000504678 1527 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC130686.1-201ENST00000622936 2466 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC142381.1-201ENST00000426099 345 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AL592309.1-201ENST00000443127 649 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC004967.1-201ENST00000453589 447 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC069335.1-201ENST00000489972 472 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC098859.1-201ENST00000502915 1238 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 IGHV3-62-201ENST00000520057 340 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AP000842.3-202ENST00000569238 1080 ntBASIC14.87□□□□□ -0.03
LINGO3P0C6S8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINGO3P0C6S8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms