Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 RPL35P9-201ENST00000446059 350 ntBASIC22.27■■□□□ 1.16
RAPGEF3O95398 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RAPGEF3O95398 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC22.27■■□□□ 1.15
RAPGEF3O95398 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RAPGEF3O95398 AC021305.1-201ENST00000520656 1514 ntBASIC22.26■■□□□ 1.15
RAPGEF3O95398 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 RN7SKP109-201ENST00000410592 316 ntBASIC22.26■■□□□ 1.15
RAPGEF3O95398 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 AL512306.1-201ENST00000432698 848 ntBASIC22.26■■□□□ 1.15
RAPGEF3O95398 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 AC093826.1-201ENST00000508655 993 ntBASIC22.26■■□□□ 1.15
RAPGEF3O95398 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 AC138701.2-201ENST00000553634 226 ntBASIC22.26■■□□□ 1.15
RAPGEF3O95398 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF3O95398 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF3O95398 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 KRT17P5-201ENST00000332088 839 ntBASIC22.25■■□□□ 1.15
RAPGEF3O95398 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 BRI3P1-201ENST00000440440 378 ntBASIC22.25■■□□□ 1.15
RAPGEF3O95398 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AL035414.1-201ENST00000451327 857 ntBASIC22.25■■□□□ 1.15
RAPGEF3O95398 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 AC004554.1-201ENST00000422830 1468 ntBASIC22.25■■□□□ 1.15
RAPGEF3O95398 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF3O95398 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 MTHFR-217ENST00000641820 1569 ntBASIC22.25■■□□□ 1.15
RAPGEF3O95398 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF3O95398 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC22.24■■□□□ 1.15
RAPGEF3O95398 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF3O95398 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF3O95398 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF3O95398 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RAPGEF3O95398 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms