Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AL592309.1-201ENST00000443127 649 ntBASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SLC25A1P1-201ENST00000528351 927 ntBASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 BANF1P1-201ENST00000553684 263 ntBASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AC027601.4-201ENST00000611259 610 ntBASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 REXO1L4P-201ENST00000605109 1937 ntBASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 AC126335.2-201ENST00000623362 4637 ntBASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRAV5A0A0B4J249 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms