Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 SPDYE19P-201ENST00000338590 713 ntBASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX49Q9Y6V7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 RN7SL618P-201ENST00000477850 296 ntBASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 AL136982.4-201ENST00000437689 1740 ntBASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX49Q9Y6V7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.46■□□□□ 0.54
DDX49Q9Y6V7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
DDX49Q9Y6V7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
DDX49Q9Y6V7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 ST20-AS1-201ENST00000560255 4223 ntBASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX49Q9Y6V7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms