Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AL139099.5-201ENST00000635274 300 ntBASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 AC092384.3-202ENST00000564646 2873 ntBASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1G3Q9Y6M4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 AL354989.2-201ENST00000435838 1540 ntBASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1G3Q9Y6M4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 LINC02228-204ENST00000642115 2962 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 MTX1P1-201ENST00000440904 838 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AC104306.2-201ENST00000451877 341 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 MIR4741-201ENST00000579822 90 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ECM1P1-201ENST00000604092 1279 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 AL158070.2-201ENST00000623713 1621 ntBASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1G3Q9Y6M4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 NORAD-201ENST00000565493 5339 ntBASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 PKD1P5-201ENST00000532415 10291 ntBASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 AP002414.2-201ENST00000591780 3365 ntBASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CSNK1G3Q9Y6M4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms