Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AL513210.1-201ENST00000629608 234 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC027601.5-201ENST00000624065 2482 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 GPS2P2-201ENST00000430745 888 ntBASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 KRT18P64-201ENST00000434946 1219 ntBASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 SPDYE14P-201ENST00000442619 822 ntBASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 KRT18P43-201ENST00000469825 1281 ntBASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 AL033527.5-202ENST00000641632 1098 ntBASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CDC42SE2Q9NRR3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 LINC01230-201ENST00000625222 3017 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms