Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 KRT8P22-201ENST00000562317 1415 ntBASIC13.53□□□□□ -0.24
AP3S1Q92572 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 AC007787.1-201ENST00000588095 1583 ntBASIC13.53□□□□□ -0.24
AP3S1Q92572 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
AP3S1Q92572 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.52□□□□□ -0.24
AP3S1Q92572 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
AP3S1Q92572 AL356585.2-201ENST00000625078 2396 ntBASIC13.52□□□□□ -0.24
AP3S1Q92572 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
AP3S1Q92572 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.52□□□□□ -0.24
AP3S1Q92572 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S1Q92572 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AP3S1Q92572 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
AP3S1Q92572 AL596275.1-201ENST00000423464 877 ntBASIC13.52□□□□□ -0.25
AP3S1Q92572 EEF1DP4-201ENST00000446006 880 ntBASIC13.52□□□□□ -0.25
AP3S1Q92572 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.52□□□□□ -0.25
AP3S1Q92572 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.52□□□□□ -0.25
AP3S1Q92572 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.52□□□□□ -0.25
AP3S1Q92572 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.52□□□□□ -0.25
AP3S1Q92572 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.52□□□□□ -0.25
AP3S1Q92572 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 AC097359.3-201ENST00000603982 1210 ntBASIC13.52□□□□□ -0.25
AP3S1Q92572 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.52□□□□□ -0.25
AP3S1Q92572 AL732292.2-201ENST00000609649 430 ntBASIC13.52□□□□□ -0.25
AP3S1Q92572 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AP3S1Q92572 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.52□□□□□ -0.25
AP3S1Q92572 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AP3S1Q92572 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AP3S1Q92572 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.52□□□□□ -0.25
AP3S1Q92572 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.52□□□□□ -0.25
AP3S1Q92572 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AP3S1Q92572 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
AP3S1Q92572 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S1Q92572 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 FAM86EP-206ENST00000510506 987 ntBASIC13.51□□□□□ -0.25
AP3S1Q92572 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.51□□□□□ -0.25
AP3S1Q92572 SPTSSB-204ENST00000617024 1292 ntBASIC13.51□□□□□ -0.25
AP3S1Q92572 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms