Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC004890.2-204ENST00000481968 304 ntBASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AL158212.4-201ENST00000624062 1286 ntBASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LSMEM1Q8N8F7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SRD5A3P1-201ENST00000603021 949 ntBASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 AL390755.1-201ENST00000623716 2027 ntBASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LSMEM1Q8N8F7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 DGCR9-201ENST00000609630 2415 ntBASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LSMEM1Q8N8F7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms