Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 TMBIM7P-203ENST00000641617 1718 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 C2orf27AP3-201ENST00000434123 579 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AC103810.3-201ENST00000583567 96 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AL354718.3-201ENST00000616414 581 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CR382287.1-201ENST00000623954 586 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 RHOXF1P1-202ENST00000635473 501 ntBASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC155Q8N6L0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 BCYRN1-201ENST00000418539 200 ntBASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 AC000095.1-201ENST00000603208 874 ntBASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 AC138035.3-201ENST00000622706 2791 ntBASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC155Q8N6L0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms