Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 C2orf27AP3-201ENST00000434123 579 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AC016694.1-201ENST00000434179 700 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SNX29P1-201ENST00000548357 1007 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 KRT90P-201ENST00000549264 1064 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AL354718.3-201ENST00000616414 581 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 CR382287.1-201ENST00000623954 586 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ACE3P-201ENST00000423435 1973 ntBASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ANKRD19P-201ENST00000338192 862 ntBASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 IGHV3-71-201ENST00000523324 359 ntBASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 AL603764.1-201ENST00000636452 321 ntBASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C9orf40Q8IXQ3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms