Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.33■□□□□ 0.04
ARCN1P48444 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ARCN1P48444 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.32■□□□□ 0.04
ARCN1P48444 RN7SL399P-201ENST00000471648 279 ntBASIC15.32■□□□□ 0.04
ARCN1P48444 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 API5-211ENST00000534695 560 ntTSL 5 BASIC15.32■□□□□ 0.04
ARCN1P48444 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
ARCN1P48444 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
ARCN1P48444 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ARCN1P48444 CHCHD2P3-201ENST00000603038 451 ntBASIC15.32■□□□□ 0.04
ARCN1P48444 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 AL157414.3-201ENST00000624276 1954 ntBASIC15.32■□□□□ 0.04
ARCN1P48444 AC093525.8-201ENST00000624099 1342 ntBASIC15.32■□□□□ 0.04
ARCN1P48444 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.32■□□□□ 0.04
ARCN1P48444 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ARCN1P48444 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ARCN1P48444 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
ARCN1P48444 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARCN1P48444 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ARCN1P48444 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.31■□□□□ 0.04
ARCN1P48444 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 AC140479.7-201ENST00000636301 2332 ntBASIC15.31■□□□□ 0.04
ARCN1P48444 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.31■□□□□ 0.04
ARCN1P48444 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.31■□□□□ 0.04
ARCN1P48444 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 AL353779.1-201ENST00000434793 351 ntBASIC15.31■□□□□ 0.04
ARCN1P48444 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.31■□□□□ 0.04
ARCN1P48444 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.31■□□□□ 0.04
ARCN1P48444 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.31■□□□□ 0.04
ARCN1P48444 AC036164.1-201ENST00000570544 333 ntBASIC15.31■□□□□ 0.04
ARCN1P48444 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.31■□□□□ 0.04
ARCN1P48444 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ARCN1P48444 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 AC018529.2-202ENST00000611482 3087 ntBASIC15.31■□□□□ 0.04
ARCN1P48444 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.31■□□□□ 0.04
ARCN1P48444 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ARCN1P48444 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.31■□□□□ 0.04
ARCN1P48444 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ARCN1P48444 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARCN1P48444 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.3■□□□□ 0.04
ARCN1P48444 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms