Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB4AP20338 CHCHD2P8-201ENST00000429873 447 ntBASIC11.82□□□□□ -0.52
RAB4AP20338 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.82□□□□□ -0.52
RAB4AP20338 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB4AP20338 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB4AP20338 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
RAB4AP20338 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 Z69720.1-201ENST00000601483 472 ntBASIC11.82□□□□□ -0.52
RAB4AP20338 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.82□□□□□ -0.52
RAB4AP20338 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB4AP20338 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RAB4AP20338 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 MST1P2-201ENST00000457982 2291 ntBASIC11.81□□□□□ -0.52
RAB4AP20338 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 AL365181.3-201ENST00000605886 3222 ntBASIC11.81□□□□□ -0.52
RAB4AP20338 LSINCT5-201ENST00000626215 2647 ntBASIC11.81□□□□□ -0.52
RAB4AP20338 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RAB4AP20338 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
RAB4AP20338 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 AC114341.1-201ENST00000618070 349 ntBASIC11.81□□□□□ -0.52
RAB4AP20338 AC006011.2-201ENST00000621313 1158 ntBASIC11.81□□□□□ -0.52
RAB4AP20338 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RAB4AP20338 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB4AP20338 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB4AP20338 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB4AP20338 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB4AP20338 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB4AP20338 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB4AP20338 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB4AP20338 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB4AP20338 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms