Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2B1P20020 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2B1P20020 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B1P20020 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2B1P20020 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B1P20020 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATP2B1P20020 AC092364.2-202ENST00000597012 1073 ntBASIC17.69■□□□□ 0.42
ATP2B1P20020 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B1P20020 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B1P20020 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B1P20020 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2B1P20020 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
ATP2B1P20020 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B1P20020 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2B1P20020 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B1P20020 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2B1P20020 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATP2B1P20020 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2B1P20020 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2B1P20020 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP2B1P20020 MIR4745-201ENST00000577608 62 ntBASIC17.68■□□□□ 0.42
ATP2B1P20020 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
ATP2B1P20020 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B1P20020 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B1P20020 AC006058.4-201ENST00000624016 1670 ntBASIC17.67■□□□□ 0.42
ATP2B1P20020 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP2B1P20020 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 MIR661-201ENST00000384842 89 ntBASIC17.67■□□□□ 0.42
ATP2B1P20020 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP2B1P20020 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP2B1P20020 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.67■□□□□ 0.42
ATP2B1P20020 RARRES2P5-201ENST00000564013 466 ntBASIC17.67■□□□□ 0.42
ATP2B1P20020 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATP2B1P20020 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATP2B1P20020 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ATP2B1P20020 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2B1P20020 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms