Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFAP04085 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.4□□□□□ -0.1
PDGFAP04085 FLJ16779-201ENST00000612722 7638 ntBASIC14.4□□□□□ -0.1
PDGFAP04085 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFAP04085 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PDGFAP04085 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PDGFAP04085 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
PDGFAP04085 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDGFAP04085 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.39□□□□□ -0.11
PDGFAP04085 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDGFAP04085 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 AC136604.1-201ENST00000418535 575 ntBASIC14.39□□□□□ -0.11
PDGFAP04085 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 AC006033.1-201ENST00000440505 426 ntBASIC14.39□□□□□ -0.11
PDGFAP04085 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.39□□□□□ -0.11
PDGFAP04085 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.39□□□□□ -0.11
PDGFAP04085 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PDGFAP04085 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.39□□□□□ -0.11
PDGFAP04085 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.39□□□□□ -0.11
PDGFAP04085 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PDGFAP04085 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 REXO1L1P-202ENST00000608646 1974 ntBASIC14.39□□□□□ -0.11
PDGFAP04085 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDGFAP04085 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.39□□□□□ -0.11
PDGFAP04085 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 AL607033.1-201ENST00000623900 1599 ntBASIC14.39□□□□□ -0.11
PDGFAP04085 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFAP04085 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 AL121723.1-201ENST00000445194 1519 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PDGFAP04085 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 CNN2P8-201ENST00000421872 913 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.38□□□□□ -0.11
PDGFAP04085 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 KRT8P13-201ENST00000463294 1010 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.38□□□□□ -0.11
PDGFAP04085 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.38□□□□□ -0.11
PDGFAP04085 AC022137.2-201ENST00000503482 481 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 RHOQP1-201ENST00000555758 579 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms