Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 AC011742.3-201ENST00000439053 820 ntBASIC16.78■□□□□ 0.28
CD4P01730 AC021723.1-201ENST00000486306 515 ntBASIC16.78■□□□□ 0.28
CD4P01730 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.78■□□□□ 0.28
CD4P01730 AL161670.2-201ENST00000557650 1227 ntBASIC16.78■□□□□ 0.28
CD4P01730 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.78■□□□□ 0.28
CD4P01730 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.78■□□□□ 0.28
CD4P01730 AC138466.3-201ENST00000619983 221 ntBASIC16.78■□□□□ 0.28
CD4P01730 AL353726.2-201ENST00000623259 884 ntBASIC16.78■□□□□ 0.28
CD4P01730 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
CD4P01730 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 CLUHP2-201ENST00000426660 1303 ntBASIC16.77■□□□□ 0.28
CD4P01730 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 AC007274.2-201ENST00000421675 662 ntBASIC16.77■□□□□ 0.28
CD4P01730 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 RNMTL1P1-201ENST00000454103 560 ntBASIC16.77■□□□□ 0.28
CD4P01730 AC012618.1-201ENST00000461223 412 ntBASIC16.77■□□□□ 0.28
CD4P01730 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.77■□□□□ 0.28
CD4P01730 SAMD11P1-201ENST00000571429 661 ntBASIC16.77■□□□□ 0.28
CD4P01730 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 AC018635.2-201ENST00000608625 364 ntBASIC16.77■□□□□ 0.28
CD4P01730 MIR7845-201ENST00000618396 99 ntBASIC16.77■□□□□ 0.28
CD4P01730 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.77■□□□□ 0.28
CD4P01730 AC004923.1-202ENST00000642106 209 ntBASIC16.77■□□□□ 0.28
CD4P01730 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.77■□□□□ 0.28
CD4P01730 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD4P01730 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.77■□□□□ 0.27
CD4P01730 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CD4P01730 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.77■□□□□ 0.27
CD4P01730 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CD4P01730 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CD4P01730 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.76■□□□□ 0.27
CD4P01730 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.76■□□□□ 0.27
CD4P01730 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.76■□□□□ 0.27
CD4P01730 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CD4P01730 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD4P01730 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms