Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 U91328.1-201ENST00000437528 223 ntBASIC15.46■□□□□ 0.07
PRAMEF11O60813 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 AC026434.2-201ENST00000506094 1078 ntBASIC15.46■□□□□ 0.07
PRAMEF11O60813 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 AL162274.1-201ENST00000617191 1098 ntBASIC15.46■□□□□ 0.07
PRAMEF11O60813 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.46■□□□□ 0.06
PRAMEF11O60813 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.46■□□□□ 0.06
PRAMEF11O60813 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRAMEF11O60813 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 DBET-201ENST00000630918 3363 ntBASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 AC025279.2-201ENST00000569730 653 ntBASIC15.45■□□□□ 0.06
PRAMEF11O60813 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRAMEF11O60813 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PRAMEF11O60813 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PRAMEF11O60813 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.44■□□□□ 0.06
PRAMEF11O60813 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.44■□□□□ 0.06
PRAMEF11O60813 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.44■□□□□ 0.06
PRAMEF11O60813 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PRAMEF11O60813 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRAMEF11O60813 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms