Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC243562.1-201ENST00000560672 389 ntBASIC13.13□□□□□ -0.31
TMEM235A6NFC5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 AP3S2-216ENST00000617003 1561 ntBASIC13.12□□□□□ -0.31
TMEM235A6NFC5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 SPCS2P4-201ENST00000436160 681 ntBASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 IGHV3-62-201ENST00000520057 340 ntBASIC13.12□□□□□ -0.31
TMEM235A6NFC5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM235A6NFC5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.11□□□□□ -0.31
TMEM235A6NFC5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 AC012508.2-201ENST00000567613 1472 ntBASIC13.11□□□□□ -0.31
TMEM235A6NFC5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SLC25A6P4-201ENST00000586535 553 ntBASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms