Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTFDC1Q9BY42 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTFDC1Q9BY42 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
RTFDC1Q9BY42 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AC092850.2-201ENST00000623821 2697 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AL008718.2-201ENST00000609206 1313 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 RN7SL181P-201ENST00000462921 277 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 MIR4750-201ENST00000584564 56 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 MBLAC2-202ENST00000514906 1936 ntBASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.31■□□□□ 0.52
RTFDC1Q9BY42 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC090616.6-203ENST00000579186 1945 ntBASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 SCARNA21-201ENST00000517026 139 ntBASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 COX6A1P2-201ENST00000620597 330 ntBASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTFDC1Q9BY42 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms