Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.24□□□□□ -0.61
MUC4Q99102 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 IGHV3-72-202ENST00000621503 303 ntBASIC11.24□□□□□ -0.61
MUC4Q99102 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.24□□□□□ -0.61
MUC4Q99102 Z97205.2-201ENST00000564697 1639 ntBASIC11.24□□□□□ -0.61
MUC4Q99102 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 FO393414.2-201ENST00000405153 598 ntBASIC11.24□□□□□ -0.61
MUC4Q99102 GHSR-202ENST00000427970 912 ntBASIC11.24□□□□□ -0.61
MUC4Q99102 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.24□□□□□ -0.61
MUC4Q99102 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.24□□□□□ -0.61
MUC4Q99102 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.24□□□□□ -0.61
MUC4Q99102 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.24□□□□□ -0.61
MUC4Q99102 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MUC4Q99102 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.24□□□□□ -0.61
MUC4Q99102 CU639417.3-201ENST00000624240 1404 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 AP001267.2-201ENST00000532619 2086 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 AL512361.1-201ENST00000554200 418 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.23□□□□□ -0.61
MUC4Q99102 RN7SL828P-201ENST00000607615 303 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 AC073592.8-201ENST00000624126 511 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 WASH3P-207ENST00000560956 1394 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 FO538757.1-201ENST00000623083 1397 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 MTHFR-210ENST00000641407 2387 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms