Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 UPF3AP2-201ENST00000457924 1132 ntBASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 RBM8B-201ENST00000555532 525 ntBASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 KRT8P28-201ENST00000433288 1390 ntBASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 CICP12-201ENST00000455801 843 ntBASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 RNA5SP423-201ENST00000517127 109 ntBASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 AL136295.7-201ENST00000619226 1200 ntBASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP2Q96SN8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 RN7SKP214-201ENST00000364208 315 ntBASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms