Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 RPL37AP1-201ENST00000412502 279 ntBASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 AC007967.4-201ENST00000614700 386 ntBASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHAMP1Q96JM3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 RPL13P2-201ENST00000440687 659 ntBASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 AC106028.4-201ENST00000614509 607 ntBASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHAMP1Q96JM3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHAMP1Q96JM3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 Z97205.2-201ENST00000564697 1639 ntBASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHAMP1Q96JM3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms