Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HPS1Q92902 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.18□□□□□ -0.14
HPS1Q92902 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.18□□□□□ -0.14
HPS1Q92902 AC025678.2-201ENST00000562061 970 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.18□□□□□ -0.14
HPS1Q92902 AC027612.4-201ENST00000605371 583 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HPS1Q92902 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HPS1Q92902 PPT1-213ENST00000641319 2388 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.18□□□□□ -0.14
HPS1Q92902 AC089987.1-201ENST00000551654 2209 ntBASIC14.18□□□□□ -0.14
HPS1Q92902 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
HPS1Q92902 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
HPS1Q92902 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HPS1Q92902 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 AC006277.1-201ENST00000624348 1610 ntBASIC14.17□□□□□ -0.14
HPS1Q92902 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.17□□□□□ -0.14
HPS1Q92902 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC14.17□□□□□ -0.14
HPS1Q92902 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 MIR3197-201ENST00000582241 73 ntBASIC14.17□□□□□ -0.14
HPS1Q92902 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.17□□□□□ -0.14
HPS1Q92902 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.17□□□□□ -0.14
HPS1Q92902 AL139011.1-202ENST00000642063 584 ntBASIC14.17□□□□□ -0.14
HPS1Q92902 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HPS1Q92902 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
HPS1Q92902 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HPS1Q92902 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms