Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 BASP1P1-201ENST00000430708 665 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CNOT9Q92600 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT9Q92600 AC104794.3-201ENST00000566840 1248 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 AL391069.4-201ENST00000609583 481 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT9Q92600 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT9Q92600 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 CLK3P2-201ENST00000427566 1453 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CNOT9Q92600 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CNOT9Q92600 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 AC097376.2-205ENST00000610159 5334 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT9Q92600 AC106881.1-201ENST00000605849 3329 ntBASIC14.17□□□□□ -0.14
CNOT9Q92600 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 CICP23-201ENST00000605013 2741 ntBASIC14.16□□□□□ -0.14
CNOT9Q92600 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT9Q92600 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT9Q92600 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT9Q92600 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 AL645728.2-202ENST00000641679 227 ntBASIC14.16□□□□□ -0.14
CNOT9Q92600 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT9Q92600 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 AC023908.3-201ENST00000564211 3047 ntBASIC14.16□□□□□ -0.14
CNOT9Q92600 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 ACE3P-201ENST00000423435 1973 ntBASIC14.16□□□□□ -0.14
CNOT9Q92600 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT9Q92600 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT9Q92600 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CNOT9Q92600 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 REXO1L4P-201ENST00000605109 1937 ntBASIC14.15□□□□□ -0.14
CNOT9Q92600 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CNOT9Q92600 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT9Q92600 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CNOT9Q92600 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CNOT9Q92600 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT9Q92600 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT9Q92600 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.15□□□□□ -0.14
CNOT9Q92600 AC104457.1-201ENST00000401024 814 ntBASIC14.15□□□□□ -0.14
CNOT9Q92600 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.15□□□□□ -0.14
CNOT9Q92600 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.15□□□□□ -0.14
CNOT9Q92600 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.15□□□□□ -0.14
CNOT9Q92600 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT9Q92600 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms