Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CD164-210ENST00000512821 964 ntTSL 2 BASIC21.04■□□□□ 0.96
UBR1Q8IWV7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC21.04■□□□□ 0.96
UBR1Q8IWV7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR1Q8IWV7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.04■□□□□ 0.96
UBR1Q8IWV7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 AC002472.4-201ENST00000641915 272 ntBASIC21.03■□□□□ 0.96
UBR1Q8IWV7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 CYP2T1P-202ENST00000641596 2535 ntBASIC21.03■□□□□ 0.96
UBR1Q8IWV7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBR1Q8IWV7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.02■□□□□ 0.96
UBR1Q8IWV7 KRT8P1-201ENST00000557533 1207 ntBASIC21.02■□□□□ 0.96
UBR1Q8IWV7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21.02■□□□□ 0.96
UBR1Q8IWV7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBR1Q8IWV7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 DUX4L50-201ENST00000455245 715 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AC244197.1-201ENST00000456494 951 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AC140113.1-201ENST00000603467 169 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AL451007.2-201ENST00000632004 563 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AD000864.1-201ENST00000624076 2295 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
UBR1Q8IWV7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC21■□□□□ 0.95
UBR1Q8IWV7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 AC010491.1-201ENST00000563101 2797 ntBASIC21■□□□□ 0.95
UBR1Q8IWV7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
UBR1Q8IWV7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21■□□□□ 0.95
UBR1Q8IWV7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBR1Q8IWV7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21■□□□□ 0.95
UBR1Q8IWV7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms