Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 LINC00552-201ENST00000625151 2579 ntBASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 REXO1L4P-201ENST00000605109 1937 ntBASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AL390754.1-201ENST00000619088 582 ntBASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC138969.3-201ENST00000546612 1459 ntBASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC138932.2-201ENST00000548268 1459 ntBASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 AC126755.4-201ENST00000549796 1459 ntBASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00346Q8IVM7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 AC241585.1-201ENST00000433527 519 ntBASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 TIMM17BP1-201ENST00000545713 516 ntBASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms