Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ATG4DQ86TL0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AL645937.2-201ENST00000396808 931 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 COX5BP8-201ENST00000416911 349 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TP53TG3HP-202ENST00000569755 579 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 MIR8072-201ENST00000614241 80 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 FAM45BP-202ENST00000592932 1624 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AL157414.3-201ENST00000624276 1954 ntBASIC13.88□□□□□ -0.19
ATG4DQ86TL0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATG4DQ86TL0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 CICP14-201ENST00000629111 2732 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 AL158070.2-201ENST00000623713 1621 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 INTS4P2-202ENST00000614726 2019 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 HLA-K-203ENST00000430151 1046 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 DFFBP1-201ENST00000433250 979 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.87□□□□□ -0.19
ATG4DQ86TL0 AC140912.1-201ENST00000577171 1054 ntBASIC13.87□□□□□ -0.19
ATG4DQ86TL0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms