Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 MTND6P24-201ENST00000440466 518 ntBASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AC069120.2-201ENST00000524091 540 ntBASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AL158211.3-201ENST00000607385 239 ntBASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AL589739.1-201ENST00000607720 493 ntBASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 ZBED1P1-201ENST00000502364 1930 ntBASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 AC127383.1-201ENST00000444697 1800 ntBASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATPAF1Q5TC12 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 FO538757.1-201ENST00000623083 1397 ntBASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 AC073592.8-201ENST00000624126 511 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms