Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.38□□□□□ -0.27
CLDN12P56749 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.38□□□□□ -0.27
CLDN12P56749 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.38□□□□□ -0.27
CLDN12P56749 AP000842.3-202ENST00000569238 1080 ntBASIC13.38□□□□□ -0.27
CLDN12P56749 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 AC092865.6-201ENST00000642101 219 ntBASIC13.38□□□□□ -0.27
CLDN12P56749 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.38□□□□□ -0.27
CLDN12P56749 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN12P56749 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN12P56749 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN12P56749 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CLDN12P56749 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CLDN12P56749 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 AC004870.1-201ENST00000315132 882 ntBASIC13.37□□□□□ -0.27
CLDN12P56749 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN12P56749 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDN12P56749 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN12P56749 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDN12P56749 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN12P56749 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN12P56749 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
CLDN12P56749 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CLDN12P56749 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CLDN12P56749 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN12P56749 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLDN12P56749 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN12P56749 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CLDN12P56749 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms