Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDE1AP54750 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE1AP54750 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 RNU1-114P-201ENST00000365297 166 ntBASIC18.65■□□□□ 0.58
PDE1AP54750 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 AL139094.1-201ENST00000405549 1188 ntBASIC18.65■□□□□ 0.58
PDE1AP54750 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
PDE1AP54750 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE1AP54750 AC133539.2-201ENST00000604757 467 ntBASIC18.65■□□□□ 0.58
PDE1AP54750 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE1AP54750 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.64■□□□□ 0.58
PDE1AP54750 MTHFR-210ENST00000641407 2387 ntBASIC18.64■□□□□ 0.58
PDE1AP54750 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.64■□□□□ 0.58
PDE1AP54750 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PDE1AP54750 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE1AP54750 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PDE1AP54750 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.64■□□□□ 0.58
PDE1AP54750 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 AC023090.2-201ENST00000625182 2110 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE1AP54750 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE1AP54750 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 TERF1P3-201ENST00000505638 1227 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PDE1AP54750 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.64■□□□□ 0.57
PDE1AP54750 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE1AP54750 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
PDE1AP54750 TP53TG3HP-202ENST00000569755 579 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 AC140912.1-201ENST00000577171 1054 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 CLUHP6-201ENST00000580789 941 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.64■□□□□ 0.57
PDE1AP54750 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 KRT8P14-201ENST00000414254 1442 ntBASIC18.64■□□□□ 0.57
PDE1AP54750 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDE1AP54750 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE1AP54750 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE1AP54750 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 AL513477.1-201ENST00000602865 2407 ntBASIC18.63■□□□□ 0.57
PDE1AP54750 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDE1AP54750 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE1AP54750 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 AC232323.1-201ENST00000540724 2099 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms