Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 AC018529.2-202ENST00000611482 3087 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A2P43004 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A2P43004 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A2P43004 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A2P43004 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A2P43004 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC1A2P43004 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A2P43004 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A2P43004 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A2P43004 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 MTHFR-210ENST00000641407 2387 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A2P43004 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A2P43004 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A2P43004 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 AC004066.1-201ENST00000502488 802 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
SLC1A2P43004 AC023310.3-201ENST00000557027 670 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC1A2P43004 AC100756.1-201ENST00000562736 682 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 AC138749.3-201ENST00000567691 622 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A2P43004 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A2P43004 AC116165.1-201ENST00000611806 668 ntBASIC15.27■□□□□ 0.04
SLC1A2P43004 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A2P43004 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A2P43004 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A2P43004 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A2P43004 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC1A2P43004 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC1A2P43004 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC1A2P43004 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A2P43004 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A2P43004 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A2P43004 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 DRD5P1-201ENST00000456605 1438 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A2P43004 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A2P43004 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A2P43004 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A2P43004 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 AL360270.3-201ENST00000609118 1348 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC1A2P43004 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC1A2P43004 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 BASP1P1-201ENST00000430708 665 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A2P43004 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 FAM86LP-201ENST00000478302 853 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 DOC2GP-202ENST00000514950 1163 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 TPRX2P-201ENST00000535362 881 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 RARRES2P5-201ENST00000564013 466 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A2P43004 AL049840.4-201ENST00000602422 811 ntBASIC15.26■□□□□ 0.03
SLC1A2P43004 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC1A2P43004 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A2P43004 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms