Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLCN1P35523 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 NFIC-211ENST00000641145 8399 ntBASIC17.5■□□□□ 0.39
CLCN1P35523 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 MIR940-201ENST00000401276 94 ntBASIC17.5■□□□□ 0.39
CLCN1P35523 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLCN1P35523 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.5■□□□□ 0.39
CLCN1P35523 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.5■□□□□ 0.39
CLCN1P35523 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLCN1P35523 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCN1P35523 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLCN1P35523 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCN1P35523 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CLCN1P35523 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN1P35523 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLCN1P35523 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCN1P35523 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CLCN1P35523 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLCN1P35523 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCN1P35523 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 AL022342.1-201ENST00000400363 863 ntBASIC17.49■□□□□ 0.39
CLCN1P35523 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCN1P35523 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 AC112191.1-201ENST00000523689 701 ntBASIC17.49■□□□□ 0.39
CLCN1P35523 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCN1P35523 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCN1P35523 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLCN1P35523 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CLCN1P35523 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLCN1P35523 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCN1P35523 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CLCN1P35523 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 AC098799.1-201ENST00000504752 800 ntBASIC17.48■□□□□ 0.39
CLCN1P35523 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms