Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.65□□□□□ -0.22
CD40LGP29965 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.65□□□□□ -0.22
CD40LGP29965 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.65□□□□□ -0.22
CD40LGP29965 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 AC073648.2-201ENST00000510116 352 ntBASIC13.65□□□□□ -0.22
CD40LGP29965 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 AC107918.2-201ENST00000530817 355 ntBASIC13.65□□□□□ -0.22
CD40LGP29965 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.65□□□□□ -0.22
CD40LGP29965 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 AC016397.2-201ENST00000624848 1985 ntBASIC13.65□□□□□ -0.22
CD40LGP29965 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.64□□□□□ -0.23
CD40LGP29965 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 AC138969.3-201ENST00000546612 1459 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 AC138932.2-201ENST00000548268 1459 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 AC126755.4-201ENST00000549796 1459 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.64□□□□□ -0.23
CD40LGP29965 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.64□□□□□ -0.23
CD40LGP29965 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 AC021097.1-201ENST00000607902 574 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 AL355877.3-201ENST00000622820 899 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 AC012313.10-201ENST00000623509 926 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 AL022326.1-202ENST00000641533 845 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 CICP16-201ENST00000502609 2813 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CD40LGP29965 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40LGP29965 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms