Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.5□□□□□ -0.25
ATF1P18846 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.5□□□□□ -0.25
ATF1P18846 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.5□□□□□ -0.25
ATF1P18846 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 AL513210.1-201ENST00000629608 234 ntBASIC13.5□□□□□ -0.25
ATF1P18846 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ATF1P18846 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 AC152010.1-201ENST00000415779 2006 ntBASIC13.49□□□□□ -0.25
ATF1P18846 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.49□□□□□ -0.25
ATF1P18846 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.49□□□□□ -0.25
ATF1P18846 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ATF1P18846 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 AL627223.1-201ENST00000416693 442 ntBASIC13.49□□□□□ -0.25
ATF1P18846 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.49□□□□□ -0.25
ATF1P18846 DNAJB3-201ENST00000446806 729 ntBASIC13.49□□□□□ -0.25
ATF1P18846 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.49□□□□□ -0.25
ATF1P18846 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.49□□□□□ -0.25
ATF1P18846 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ATF1P18846 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ATF1P18846 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.49□□□□□ -0.25
ATF1P18846 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATF1P18846 MBLAC2-202ENST00000514906 1936 ntBASIC13.49□□□□□ -0.25
ATF1P18846 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATF1P18846 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATF1P18846 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms