Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 EEF1DP4-201ENST00000446006 880 ntBASIC14.53□□□□□ -0.08
MT-ND1P03886 ACTG1P14-201ENST00000446382 1122 ntBASIC14.53□□□□□ -0.08
MT-ND1P03886 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.53□□□□□ -0.08
MT-ND1P03886 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.53□□□□□ -0.08
MT-ND1P03886 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.53□□□□□ -0.08
MT-ND1P03886 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.53□□□□□ -0.08
MT-ND1P03886 KRT8P23-201ENST00000560090 1207 ntBASIC14.53□□□□□ -0.08
MT-ND1P03886 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.53□□□□□ -0.08
MT-ND1P03886 AP000842.3-202ENST00000569238 1080 ntBASIC14.53□□□□□ -0.08
MT-ND1P03886 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.53□□□□□ -0.08
MT-ND1P03886 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MT-ND1P03886 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
MT-ND1P03886 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.52□□□□□ -0.08
MT-ND1P03886 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MT-ND1P03886 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.52□□□□□ -0.08
MT-ND1P03886 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.52□□□□□ -0.08
MT-ND1P03886 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MT-ND1P03886 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 HLA-H-201ENST00000383620 1096 ntBASIC14.52□□□□□ -0.09
MT-ND1P03886 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.52□□□□□ -0.09
MT-ND1P03886 SPCS2P4-201ENST00000436160 681 ntBASIC14.52□□□□□ -0.09
MT-ND1P03886 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.52□□□□□ -0.09
MT-ND1P03886 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.52□□□□□ -0.09
MT-ND1P03886 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MT-ND1P03886 AC079140.1-201ENST00000508039 487 ntBASIC14.52□□□□□ -0.09
MT-ND1P03886 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.52□□□□□ -0.09
MT-ND1P03886 IGHV3-62-201ENST00000520057 340 ntBASIC14.52□□□□□ -0.09
MT-ND1P03886 LINC01225-203ENST00000563550 1244 ntBASIC14.52□□□□□ -0.09
MT-ND1P03886 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.52□□□□□ -0.09
MT-ND1P03886 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.52□□□□□ -0.09
MT-ND1P03886 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.52□□□□□ -0.09
MT-ND1P03886 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MT-ND1P03886 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MT-ND1P03886 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
MT-ND1P03886 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MT-ND1P03886 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
MT-ND1P03886 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.51□□□□□ -0.09
MT-ND1P03886 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MT-ND1P03886 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms