Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RN7SL48P-201ENST00000579283 293 ntBASIC13.74□□□□□ -0.21
ZIC3O60481 AL359881.2-201ENST00000602973 570 ntBASIC13.74□□□□□ -0.21
ZIC3O60481 AL008721.1-201ENST00000609964 604 ntBASIC13.74□□□□□ -0.21
ZIC3O60481 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZIC3O60481 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 LILRP1-201ENST00000444199 1370 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZIC3O60481 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 AC006001.1-201ENST00000325130 474 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 FAM197Y7-201ENST00000432892 766 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 RNA5SP486-201ENST00000515961 83 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.73□□□□□ -0.21
ZIC3O60481 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 COX11-210ENST00000639671 696 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZIC3O60481 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 AC055811.4-201ENST00000624039 1754 ntBASIC13.73□□□□□ -0.21
ZIC3O60481 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.73□□□□□ -0.21
ZIC3O60481 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZIC3O60481 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.73□□□□□ -0.21
ZIC3O60481 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ZIC3O60481 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.72□□□□□ -0.21
ZIC3O60481 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms