Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.54□□□□□ -0.08
UPK1AO00322 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
UPK1AO00322 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 BASP1P1-201ENST00000430708 665 ntBASIC14.54□□□□□ -0.08
UPK1AO00322 AL512638.1-201ENST00000457493 794 ntBASIC14.54□□□□□ -0.08
UPK1AO00322 SPDYE18-201ENST00000510091 1050 ntBASIC14.54□□□□□ -0.08
UPK1AO00322 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.54□□□□□ -0.08
UPK1AO00322 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.54□□□□□ -0.08
UPK1AO00322 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
UPK1AO00322 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 AP001267.2-201ENST00000532619 2086 ntBASIC14.54□□□□□ -0.08
UPK1AO00322 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.54□□□□□ -0.08
UPK1AO00322 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
UPK1AO00322 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
UPK1AO00322 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 MRPS18AP1-201ENST00000414458 589 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 CYMP-203ENST00000474680 1263 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 AC093214.1-201ENST00000511688 1107 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 AC135586.1-201ENST00000539323 574 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
UPK1AO00322 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.53□□□□□ -0.08
UPK1AO00322 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1AO00322 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UPK1AO00322 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1AO00322 BEND3P1-201ENST00000421591 1944 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 AC113367.3-201ENST00000508316 1912 ntBASIC14.53□□□□□ -0.08
UPK1AO00322 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
UPK1AO00322 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.52□□□□□ -0.08
UPK1AO00322 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
UPK1AO00322 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.52□□□□□ -0.08
UPK1AO00322 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
UPK1AO00322 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
UPK1AO00322 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1AO00322 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.52□□□□□ -0.08
UPK1AO00322 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.52□□□□□ -0.08
UPK1AO00322 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.52□□□□□ -0.09
UPK1AO00322 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.52□□□□□ -0.09
UPK1AO00322 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
UPK1AO00322 AL589987.1-201ENST00000453380 819 ntBASIC14.52□□□□□ -0.09
UPK1AO00322 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms