Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC245100.3-201ENST00000441281 285 ntBASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC104306.2-201ENST00000451877 341 ntBASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AL022328.3-201ENST00000607943 679 ntBASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TBC1D3FA6NER0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TBC1D3FA6NER0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 MTX1P1-201ENST00000440904 838 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AP006547.1-201ENST00000563435 692 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 EEF1DP1-201ENST00000585891 896 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms