Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 DUX4L9-201ENST00000449051 1259 ntBASIC21.52■■□□□ 1.04
IFT52Q9Y366 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
IFT52Q9Y366 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.52■■□□□ 1.04
IFT52Q9Y366 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.52■■□□□ 1.04
IFT52Q9Y366 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.52■■□□□ 1.03
IFT52Q9Y366 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
IFT52Q9Y366 AL592295.1-201ENST00000400984 884 ntBASIC21.51■■□□□ 1.03
IFT52Q9Y366 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
IFT52Q9Y366 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
IFT52Q9Y366 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
IFT52Q9Y366 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT52Q9Y366 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
IFT52Q9Y366 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.5■■□□□ 1.03
IFT52Q9Y366 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
IFT52Q9Y366 U85056.1-201ENST00000616429 682 ntBASIC21.5■■□□□ 1.03
IFT52Q9Y366 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IFT52Q9Y366 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
IFT52Q9Y366 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.49■■□□□ 1.03
IFT52Q9Y366 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.49■■□□□ 1.03
IFT52Q9Y366 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
IFT52Q9Y366 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IFT52Q9Y366 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.48■■□□□ 1.03
IFT52Q9Y366 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
IFT52Q9Y366 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.48■■□□□ 1.03
IFT52Q9Y366 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.48■■□□□ 1.03
IFT52Q9Y366 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT52Q9Y366 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
IFT52Q9Y366 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.47■■□□□ 1.03
IFT52Q9Y366 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT52Q9Y366 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.47■■□□□ 1.03
IFT52Q9Y366 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT52Q9Y366 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT52Q9Y366 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT52Q9Y366 AC090877.2-201ENST00000558441 1738 ntBASIC21.46■■□□□ 1.03
IFT52Q9Y366 AC004812.2-201ENST00000611079 2094 ntBASIC21.46■■□□□ 1.03
IFT52Q9Y366 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT52Q9Y366 AC129492.7-201ENST00000622992 756 ntBASIC21.46■■□□□ 1.03
IFT52Q9Y366 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.46■■□□□ 1.03
IFT52Q9Y366 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
IFT52Q9Y366 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT52Q9Y366 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
IFT52Q9Y366 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT52Q9Y366 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT52Q9Y366 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT52Q9Y366 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT52Q9Y366 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT52Q9Y366 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT52Q9Y366 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.44■■□□□ 1.02
IFT52Q9Y366 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
IFT52Q9Y366 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IFT52Q9Y366 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
IFT52Q9Y366 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT52Q9Y366 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
IFT52Q9Y366 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.43■■□□□ 1.02
IFT52Q9Y366 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT52Q9Y366 LONRF2P2-201ENST00000439212 571 ntBASIC21.43■■□□□ 1.02
IFT52Q9Y366 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.43■■□□□ 1.02
IFT52Q9Y366 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
IFT52Q9Y366 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT52Q9Y366 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.43■■□□□ 1.02
IFT52Q9Y366 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT52Q9Y366 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT52Q9Y366 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT52Q9Y366 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT52Q9Y366 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT52Q9Y366 KRT18P60-201ENST00000312876 1297 ntBASIC21.42■■□□□ 1.02
IFT52Q9Y366 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
IFT52Q9Y366 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
IFT52Q9Y366 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT52Q9Y366 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.42■■□□□ 1.02
IFT52Q9Y366 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.42■■□□□ 1.02
IFT52Q9Y366 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IFT52Q9Y366 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms