Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.225e-7■■■□□ 17.6
DDX52Q9Y2R4 CPNE7-203ENST00000525982 576 ntTSL 525.39■■□□□ 1.663e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.022e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-210ENST00000576925 611 ntTSL 220.12■□□□□ 0.812e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-207ENST00000573216 545 ntTSL 420.12■□□□□ 0.812e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.02■□□□□ 0.82e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.792e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.98■□□□□ 0.792e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.66■□□□□ 0.742e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.72■□□□□ 0.592e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-213ENST00000613627 689 ntTSL 318.62■□□□□ 0.572e-6■■■□□ 17.5
DDX52Q9Y2R4 BSG-206ENST00000572899 582 ntTSL 218.52■□□□□ 0.562e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.151e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.88■■□□□ 1.731e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.511e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.86■■□□□ 1.251e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-221ENST00000552383 1267 ntTSL 219.91■□□□□ 0.781e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.56■□□□□ 0.721e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.25■□□□□ 0.351e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-209ENST00000546979 554 ntTSL 315.7■□□□□ 0.11e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-216ENST00000550958 706 ntTSL 310.99□□□□□ -0.651e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.69□□□□□ -0.861e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.76□□□□□ -1.171e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-212ENST00000549253 563 ntTSL 36.14□□□□□ -1.431e-6■■■□□ 17.5
DDX52Q9Y2R4 TGIF1-215ENST00000549780 801 ntTSL 56□□□□□ -1.451e-6■■■□□ 17.5
DDX52Q9Y2R4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.49■□□□□ 0.719e-8■■■□□ 17.4
DDX52Q9Y2R4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.079e-8■■■□□ 17.4
DDX52Q9Y2R4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.089e-8■■■□□ 17.4
DDX52Q9Y2R4 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC13.73□□□□□ -0.219e-8■■■□□ 17.4
DDX52Q9Y2R4 DAD1-204ENST00000538631 441 ntTSL 2 BASIC11.6□□□□□ -0.559e-8■■■□□ 17.4
DDX52Q9Y2R4 DAD1-203ENST00000535847 591 ntTSL 210.81□□□□□ -0.689e-8■■■□□ 17.4
DDX52Q9Y2R4 ST6GAL1-220ENST00000470633 4893 ntTSL 27.32□□□□□ -1.249e-8■■■□□ 17.4
DDX52Q9Y2R4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.299e-8■■■□□ 17.4
DDX52Q9Y2R4 NELFA-210ENST00000455762 1022 ntTSL 521.8■■□□□ 1.081e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-201ENST00000333877 2228 ntTSL 221.64■■□□□ 1.061e-7■■■□□ 17.4
DDX52Q9Y2R4 TBCD-207ENST00000571796 1940 ntTSL 1 (best)20.56■□□□□ 0.884e-6■■■□□ 17.4
DDX52Q9Y2R4 NELFA-211ENST00000458616 792 ntTSL 319.91■□□□□ 0.781e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.611e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.581e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-207ENST00000431323 888 ntTSL 517.99■□□□□ 0.471e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-206ENST00000421397 574 ntTSL 517.29■□□□□ 0.361e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-208ENST00000443203 553 ntTSL 416.66■□□□□ 0.261e-7■■■□□ 17.4
DDX52Q9Y2R4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.18■□□□□ 0.181e-7■■■□□ 17.4
DDX52Q9Y2R4 TBCD-224ENST00000576760 1059 ntTSL 514.24□□□□□ -0.134e-6■■■□□ 17.4
DDX52Q9Y2R4 NELFA-204ENST00000411649 561 ntTSL 414.21□□□□□ -0.131e-7■■■□□ 17.4
DDX52Q9Y2R4 TBCD-210ENST00000572953 702 ntTSL 513.6□□□□□ -0.234e-6■■■□□ 17.4
DDX52Q9Y2R4 TBCD-213ENST00000574422 879 ntTSL 213.35□□□□□ -0.274e-6■■■□□ 17.4
DDX52Q9Y2R4 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC12.86□□□□□ -0.351e-7■■■□□ 17.4
DDX52Q9Y2R4 TBCD-205ENST00000571618 775 ntTSL 312.52□□□□□ -0.414e-6■■■□□ 17.4
DDX52Q9Y2R4 TBCD-217ENST00000574975 867 ntTSL 512.41□□□□□ -0.424e-6■■■□□ 17.4
DDX52Q9Y2R4 ANKRD11-213ENST00000567736 2750 ntTSL 217.2■□□□□ 0.345e-7■■■□□ 17.4
DDX52Q9Y2R4 MICALL2-208ENST00000472100 5248 ntTSL 218.93■□□□□ 0.621e-6■■■□□ 17.4
DDX52Q9Y2R4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.51e-6■■■□□ 17.4
DDX52Q9Y2R4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.674e-7■■■□□ 17.3
DDX52Q9Y2R4 QSER1-203ENST00000527250 448 ntTSL 32.73□□□□□ -1.974e-7■■■□□ 17.3
DDX52Q9Y2R4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.4■■■□□ 2.622e-14■■■□□ 17.2
DDX52Q9Y2R4 GPX4-211ENST00000614791 431 ntTSL 328.09■■■□□ 2.092e-14■■■□□ 17.2
DDX52Q9Y2R4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.95■■□□□ 1.582e-14■■■□□ 17.2
DDX52Q9Y2R4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.44■■□□□ 1.52e-14■■■□□ 17.2
DDX52Q9Y2R4 TPTEP1-202ENST00000400593 1430 ntTSL 1 (best)18.85■□□□□ 0.612e-14■■■□□ 17.2
DDX52Q9Y2R4 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC14.18□□□□□ -0.142e-14■■■□□ 17.2
DDX52Q9Y2R4 TPTEP1-204ENST00000426585 5725 ntTSL 1 (best)13.48□□□□□ -0.252e-14■■■□□ 17.2
DDX52Q9Y2R4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.36□□□□□ -1.558e-7■■■□□ 17.1
DDX52Q9Y2R4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.16■□□□□ 0.981e-6■■■□□ 17.1
DDX52Q9Y2R4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.391e-6■■■□□ 17.1
DDX52Q9Y2R4 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.435e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.32■□□□□ 0.22e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.32■□□□□ 0.22e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.32■□□□□ 0.22e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-205ENST00000479021 552 ntTSL 412.39□□□□□ -0.432e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-202ENST00000415933 863 ntTSL 210.81□□□□□ -0.682e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.63□□□□□ -1.192e-6■■■□□ 17.1
DDX52Q9Y2R4 PPIA-207ENST00000481437 570 ntTSL 27.63□□□□□ -1.192e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)21.98■■□□□ 1.115e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.085e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.7■■□□□ 1.075e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.77■□□□□ 0.925e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-206ENST00000532957 3374 ntTSL 220.37■□□□□ 0.855e-6■■■□□ 17.1
DDX52Q9Y2R4 KCNH2-205ENST00000473610 2782 ntTSL 220.11■□□□□ 0.815e-6■■■□□ 17.1
DDX52Q9Y2R4 LARP4B-202ENST00000406525 681 ntTSL 532.07■■■□□ 2.722e-9■■■□□ 17.1
DDX52Q9Y2R4 LARP4B-207ENST00000476529 613 ntTSL 317.62■□□□□ 0.412e-9■■■□□ 17.1
DDX52Q9Y2R4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.32e-9■■■□□ 17.1
DDX52Q9Y2R4 LARP4B-208ENST00000481118 421 ntTSL 312.89□□□□□ -0.352e-9■■■□□ 17.1
DDX52Q9Y2R4 EIF4A1-205ENST00000577738 531 ntTSL 215.37■□□□□ 0.059e-8■■■□□ 17
DDX52Q9Y2R4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.452e-6■■■□□ 17
DDX52Q9Y2R4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.382e-6■■■□□ 17
DDX52Q9Y2R4 YWHAZ-215ENST00000518736 883 ntTSL 320.98■□□□□ 0.952e-6■■■□□ 17
DDX52Q9Y2R4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.672e-6■■■□□ 17
DDX52Q9Y2R4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.527e-7■■■□□ 17
DDX52Q9Y2R4 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC9.6□□□□□ -0.874e-6■■■□□ 16.9
DDX52Q9Y2R4 ACAP3-208ENST00000472541 1946 ntTSL 522.8■■□□□ 1.245e-6■■■□□ 16.9
DDX52Q9Y2R4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.835e-6■■■□□ 16.9
DDX52Q9Y2R4 ACAP3-211ENST00000479108 485 ntTSL 318.16■□□□□ 0.55e-6■■■□□ 16.9
DDX52Q9Y2R4 ACAP3-203ENST00000354980 582 ntTSL 516.53■□□□□ 0.245e-6■■■□□ 16.9
DDX52Q9Y2R4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.14■□□□□ 0.174e-6■■■□□ 16.9
DDX52Q9Y2R4 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)12.98□□□□□ -0.334e-6■■■□□ 16.9
DDX52Q9Y2R4 DUXAP9-203ENST00000610585 903 ntTSL 312.9□□□□□ -0.344e-6■■■□□ 16.9
DDX52Q9Y2R4 ACAP3-205ENST00000438966 265 ntTSL 38.81□□□□□ -15e-6■■■□□ 16.9
DDX52Q9Y2R4 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)6.93□□□□□ -1.34e-6■■■□□ 16.9
Retrieved 100 of 4,483 protein–RNA pairs in 88.5 ms