Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF556Q9HAH1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZNF556Q9HAH1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF556Q9HAH1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF556Q9HAH1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF556Q9HAH1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF556Q9HAH1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF556Q9HAH1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.28■■□□□ 1
ZNF556Q9HAH1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF556Q9HAH1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ZNF556Q9HAH1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.27■■□□□ 1
ZNF556Q9HAH1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ZNF556Q9HAH1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF556Q9HAH1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF556Q9HAH1 AC060814.1-201ENST00000554326 538 ntBASIC21.27■■□□□ 1
ZNF556Q9HAH1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF556Q9HAH1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
ZNF556Q9HAH1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF556Q9HAH1 C9orf163-202ENST00000624034 2573 ntBASIC21.27■□□□□ 0.99
ZNF556Q9HAH1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.27■□□□□ 0.99
ZNF556Q9HAH1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.27■□□□□ 0.99
ZNF556Q9HAH1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF556Q9HAH1 FOXO3B-201ENST00000395675 1928 ntBASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 KRT18P10-201ENST00000388836 1287 ntBASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZNF556Q9HAH1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 AC016575.1-201ENST00000607026 382 ntBASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF556Q9HAH1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 RP9P-202ENST00000450133 1212 ntBASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF556Q9HAH1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF556Q9HAH1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF556Q9HAH1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ZNF556Q9HAH1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF556Q9HAH1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF556Q9HAH1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF556Q9HAH1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms