Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 LINC00543-201ENST00000567234 1845 ntBASIC20.18■□□□□ 0.82
CPEB3Q8NE35 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 AC093323.1-202ENST00000635031 2045 ntBASIC20.17■□□□□ 0.82
CPEB3Q8NE35 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPEB3Q8NE35 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPEB3Q8NE35 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPEB3Q8NE35 AF131216.4-201ENST00000638924 1588 ntBASIC20.16■□□□□ 0.82
CPEB3Q8NE35 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPEB3Q8NE35 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CPEB3Q8NE35 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPEB3Q8NE35 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
CPEB3Q8NE35 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.13■□□□□ 0.81
CPEB3Q8NE35 AC141586.4-201ENST00000624558 1573 ntBASIC20.12■□□□□ 0.81
CPEB3Q8NE35 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPEB3Q8NE35 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 AL451085.2-201ENST00000605085 799 ntBASIC20.11■□□□□ 0.81
CPEB3Q8NE35 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.11■□□□□ 0.81
CPEB3Q8NE35 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 AC137630.3-201ENST00000607245 391 ntBASIC20.1■□□□□ 0.81
CPEB3Q8NE35 AC004812.2-201ENST00000611079 2094 ntBASIC20.1■□□□□ 0.81
CPEB3Q8NE35 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPEB3Q8NE35 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPEB3Q8NE35 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPEB3Q8NE35 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPEB3Q8NE35 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms