Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
EFCAB3Q8N7B9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
EFCAB3Q8N7B9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCAB3Q8N7B9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
EFCAB3Q8N7B9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.7■■□□□ 1.22
EFCAB3Q8N7B9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 AC004812.2-201ENST00000611079 2094 ntBASIC22.69■■□□□ 1.22
EFCAB3Q8N7B9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 AC079834.2-201ENST00000609776 1949 ntBASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCAB3Q8N7B9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 DUSP8P5-201ENST00000422884 1815 ntBASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCAB3Q8N7B9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
EFCAB3Q8N7B9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 THA1P-201ENST00000590384 1145 ntBASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 ABCB10P4-201ENST00000566803 2184 ntBASIC22.65■■□□□ 1.22
EFCAB3Q8N7B9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
EFCAB3Q8N7B9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 MIR6765-201ENST00000614092 87 ntBASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
EFCAB3Q8N7B9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EFCAB3Q8N7B9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
EFCAB3Q8N7B9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EFCAB3Q8N7B9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
EFCAB3Q8N7B9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.63■■□□□ 1.21
EFCAB3Q8N7B9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 CLDN5-201ENST00000403084 2357 ntBASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EFCAB3Q8N7B9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 SPCS2P3-201ENST00000500401 656 ntBASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 AC018755.3-202ENST00000596210 929 ntBASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.61■■□□□ 1.21
EFCAB3Q8N7B9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms