Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
DHX40Q8IX18 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DHX40Q8IX18 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DHX40Q8IX18 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DHX40Q8IX18 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DHX40Q8IX18 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
DHX40Q8IX18 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
DHX40Q8IX18 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
DHX40Q8IX18 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.75■■□□□ 1.71
DHX40Q8IX18 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.75■■□□□ 1.71
DHX40Q8IX18 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DHX40Q8IX18 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
DHX40Q8IX18 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DHX40Q8IX18 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.74■■□□□ 1.71
DHX40Q8IX18 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.74■■□□□ 1.71
DHX40Q8IX18 RAP2CP1-202ENST00000605179 643 ntBASIC25.74■■□□□ 1.71
DHX40Q8IX18 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
DHX40Q8IX18 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DHX40Q8IX18 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DHX40Q8IX18 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DHX40Q8IX18 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DHX40Q8IX18 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.73■■□□□ 1.71
DHX40Q8IX18 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DHX40Q8IX18 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 AC022413.1-201ENST00000624602 984 ntBASIC25.72■■□□□ 1.71
DHX40Q8IX18 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.72■■□□□ 1.71
DHX40Q8IX18 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DHX40Q8IX18 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
DHX40Q8IX18 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.71■■□□□ 1.71
DHX40Q8IX18 AC007029.1-201ENST00000604183 313 ntBASIC25.71■■□□□ 1.71
DHX40Q8IX18 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
DHX40Q8IX18 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DHX40Q8IX18 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.71■■□□□ 1.71
DHX40Q8IX18 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
DHX40Q8IX18 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
DHX40Q8IX18 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
DHX40Q8IX18 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DHX40Q8IX18 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.7■■□□□ 1.7
DHX40Q8IX18 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
DHX40Q8IX18 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
DHX40Q8IX18 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
DHX40Q8IX18 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.69■■□□□ 1.7
DHX40Q8IX18 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
DHX40Q8IX18 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DHX40Q8IX18 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.68■■□□□ 1.7
DHX40Q8IX18 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 RARRES2P2-201ENST00000394842 485 ntBASIC25.68■■□□□ 1.7
DHX40Q8IX18 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.68■■□□□ 1.7
DHX40Q8IX18 AC026202.3-201ENST00000600805 1127 ntBASIC25.68■■□□□ 1.7
DHX40Q8IX18 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.68■■□□□ 1.7
DHX40Q8IX18 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
DHX40Q8IX18 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
DHX40Q8IX18 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.67■■□□□ 1.7
DHX40Q8IX18 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DHX40Q8IX18 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.67■■□□□ 1.7
DHX40Q8IX18 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
DHX40Q8IX18 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DHX40Q8IX18 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DHX40Q8IX18 AL117328.2-201ENST00000624617 1940 ntBASIC25.67■■□□□ 1.7
DHX40Q8IX18 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DHX40Q8IX18 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.66■■□□□ 1.7
DHX40Q8IX18 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.66■■□□□ 1.7
DHX40Q8IX18 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.66■■□□□ 1.7
DHX40Q8IX18 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
DHX40Q8IX18 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DHX40Q8IX18 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
DHX40Q8IX18 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DHX40Q8IX18 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DHX40Q8IX18 ANOS2P-203ENST00000472227 1816 ntBASIC25.65■■□□□ 1.7
DHX40Q8IX18 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.65■■□□□ 1.7
DHX40Q8IX18 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DHX40Q8IX18 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms