Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 AC106739.1-201ENST00000617035 715 ntBASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SFTPA1Q8IWL2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SFTPA1Q8IWL2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SFTPA1Q8IWL2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SFTPA1Q8IWL2 AC133561.4-201ENST00000566112 224 ntBASIC23.57■■□□□ 1.36
SFTPA1Q8IWL2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SFTPA1Q8IWL2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SFTPA1Q8IWL2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SFTPA1Q8IWL2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.56■■□□□ 1.36
SFTPA1Q8IWL2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 AL031432.3-201ENST00000607698 485 ntBASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SFTPA1Q8IWL2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 AL136162.1-201ENST00000607711 1078 ntBASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SFTPA1Q8IWL2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 SRD5A1P1-201ENST00000442297 786 ntBASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SFTPA1Q8IWL2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SFTPA1Q8IWL2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 AC024257.2-201ENST00000549699 147 ntBASIC23.51■■□□□ 1.35
SFTPA1Q8IWL2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SFTPA1Q8IWL2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 SUDS3P1-201ENST00000505831 966 ntBASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 AC142381.2-201ENST00000566120 298 ntBASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 AC135279.3-201ENST00000610945 1311 ntBASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 AC005703.6-201ENST00000623265 1329 ntBASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SFTPA1Q8IWL2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.48■■□□□ 1.35
SFTPA1Q8IWL2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SFTPA1Q8IWL2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.47■■□□□ 1.35
SFTPA1Q8IWL2 MIR6089-201ENST00000616698 64 ntBASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms