Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PALB2Q86YC2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
PALB2Q86YC2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.19■■□□□ 1.62
PALB2Q86YC2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PALB2Q86YC2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PALB2Q86YC2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PALB2Q86YC2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PALB2Q86YC2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.18■■□□□ 1.62
PALB2Q86YC2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PALB2Q86YC2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.18■■□□□ 1.62
PALB2Q86YC2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PALB2Q86YC2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PALB2Q86YC2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.17■■□□□ 1.62
PALB2Q86YC2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PALB2Q86YC2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.17■■□□□ 1.62
PALB2Q86YC2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PALB2Q86YC2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PALB2Q86YC2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PALB2Q86YC2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.15■■□□□ 1.62
PALB2Q86YC2 AP003733.4-201ENST00000623785 1697 ntBASIC25.15■■□□□ 1.62
PALB2Q86YC2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PALB2Q86YC2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.14■■□□□ 1.62
PALB2Q86YC2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.14■■□□□ 1.62
PALB2Q86YC2 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.14■■□□□ 1.62
PALB2Q86YC2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.14■■□□□ 1.61
PALB2Q86YC2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
PALB2Q86YC2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PALB2Q86YC2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PALB2Q86YC2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PALB2Q86YC2 LINC01124-201ENST00000409786 2117 ntBASIC25.13■■□□□ 1.61
PALB2Q86YC2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.13■■□□□ 1.61
PALB2Q86YC2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.12■■□□□ 1.61
PALB2Q86YC2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.12■■□□□ 1.61
PALB2Q86YC2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.12■■□□□ 1.61
PALB2Q86YC2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PALB2Q86YC2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.12■■□□□ 1.61
PALB2Q86YC2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PALB2Q86YC2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PALB2Q86YC2 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.11■■□□□ 1.61
PALB2Q86YC2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PALB2Q86YC2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PALB2Q86YC2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PALB2Q86YC2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PALB2Q86YC2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 AC010997.5-201ENST00000609182 354 ntBASIC25.1■■□□□ 1.61
PALB2Q86YC2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
PALB2Q86YC2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PALB2Q86YC2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PALB2Q86YC2 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 AC011551.1-201ENST00000614101 683 ntBASIC25.09■■□□□ 1.61
PALB2Q86YC2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PALB2Q86YC2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.09■■□□□ 1.61
PALB2Q86YC2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.08■■□□□ 1.61
PALB2Q86YC2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.08■■□□□ 1.61
PALB2Q86YC2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PALB2Q86YC2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PALB2Q86YC2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.08■■□□□ 1.61
PALB2Q86YC2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PALB2Q86YC2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PALB2Q86YC2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PALB2Q86YC2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.07■■□□□ 1.6
PALB2Q86YC2 MIR6089-201ENST00000616698 64 ntBASIC25.07■■□□□ 1.6
PALB2Q86YC2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PALB2Q86YC2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PALB2Q86YC2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PALB2Q86YC2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.06■■□□□ 1.6
PALB2Q86YC2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
PALB2Q86YC2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PALB2Q86YC2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.06■■□□□ 1.6
PALB2Q86YC2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PALB2Q86YC2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms