Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SEL1L3Q68CR1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.46■■□□□ 1.35
SEL1L3Q68CR1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SEL1L3Q68CR1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SEL1L3Q68CR1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 KRT16P3-201ENST00000439127 1283 ntBASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 AC092028.1-203ENST00000608262 953 ntBASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SEL1L3Q68CR1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SEL1L3Q68CR1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SEL1L3Q68CR1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
SEL1L3Q68CR1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.44■■□□□ 1.34
SEL1L3Q68CR1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.43■■□□□ 1.34
SEL1L3Q68CR1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEL1L3Q68CR1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 AF131216.4-201ENST00000638924 1588 ntBASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.41■■□□□ 1.34
SEL1L3Q68CR1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 AC090877.2-201ENST00000558441 1738 ntBASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.4■■□□□ 1.34
SEL1L3Q68CR1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
SEL1L3Q68CR1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SEL1L3Q68CR1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEL1L3Q68CR1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SEL1L3Q68CR1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SEL1L3Q68CR1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.37■■□□□ 1.33
SEL1L3Q68CR1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SEL1L3Q68CR1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms