Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RPP38P78345 KRT8P33-201ENST00000508125 1423 ntBASIC21.76■■□□□ 1.07
RPP38P78345 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.76■■□□□ 1.07
RPP38P78345 PVT1_1.1-201ENST00000615125 194 ntBASIC21.76■■□□□ 1.07
RPP38P78345 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.76■■□□□ 1.07
RPP38P78345 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPP38P78345 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPP38P78345 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPP38P78345 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.76■■□□□ 1.07
RPP38P78345 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
RPP38P78345 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.75■■□□□ 1.07
RPP38P78345 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPP38P78345 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RPP38P78345 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPP38P78345 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPP38P78345 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RPP38P78345 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPP38P78345 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.74■■□□□ 1.07
RPP38P78345 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.74■■□□□ 1.07
RPP38P78345 RARRES2P1-201ENST00000474487 481 ntBASIC21.74■■□□□ 1.07
RPP38P78345 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.74■■□□□ 1.07
RPP38P78345 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.74■■□□□ 1.07
RPP38P78345 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPP38P78345 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPP38P78345 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
RPP38P78345 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RPP38P78345 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPP38P78345 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPP38P78345 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RPP38P78345 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPP38P78345 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPP38P78345 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPP38P78345 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RPP38P78345 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
RPP38P78345 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RPP38P78345 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.72■■□□□ 1.07
RPP38P78345 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPP38P78345 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.71■■□□□ 1.07
RPP38P78345 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPP38P78345 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPP38P78345 AC141586.4-201ENST00000624558 1573 ntBASIC21.71■■□□□ 1.07
RPP38P78345 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.71■■□□□ 1.07
RPP38P78345 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPP38P78345 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.71■■□□□ 1.07
RPP38P78345 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.71■■□□□ 1.07
RPP38P78345 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPP38P78345 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPP38P78345 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPP38P78345 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.7■■□□□ 1.07
RPP38P78345 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RPP38P78345 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RPP38P78345 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPP38P78345 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RPP38P78345 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.7■■□□□ 1.06
RPP38P78345 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPP38P78345 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RPP38P78345 AC103834.1-201ENST00000520383 144 ntBASIC21.69■■□□□ 1.06
RPP38P78345 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPP38P78345 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPP38P78345 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.69■■□□□ 1.06
RPP38P78345 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP38P78345 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPP38P78345 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.68■■□□□ 1.06
RPP38P78345 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RPP38P78345 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP38P78345 FOXO3B-201ENST00000395675 1928 ntBASIC21.68■■□□□ 1.06
RPP38P78345 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP38P78345 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.68■■□□□ 1.06
RPP38P78345 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPP38P78345 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RPP38P78345 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.67■■□□□ 1.06
RPP38P78345 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.67■■□□□ 1.06
RPP38P78345 AL031848.2-201ENST00000607670 837 ntBASIC21.67■■□□□ 1.06
RPP38P78345 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.67■■□□□ 1.06
RPP38P78345 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP38P78345 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.66■■□□□ 1.06
RPP38P78345 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RPP38P78345 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.66■■□□□ 1.06
RPP38P78345 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms